BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H04LP1|AL429473
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1422 1117 0.0
3x_Contig1722 215 1e-55
3x_Contig1799 131 2e-30
>3x_Contig1422
Length = 9570
Score = 1117 bits (562), Expect = 0.0
Identities = 629/654 (96%)
Strand = Plus / Minus
Query: 241 ttaagctccaaaaaacctacgttacggcgacataactctcttgcgtgactgtyaaggaca 300
|||| ||| ||||||||||||||| |||||| | |||||||| | ||||||| ||||| |
Sbjct: 9498 ttaatctctaaaaaacctacgttatggcgactttactctctttcttgactgttaaggata 9439
Query: 301 aaactttattcatttgtccatgaacaaaagcttctcattgttttgcttcggtacctcacg 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9438 aaactttagtcatttgtccatgaacaaaagcttctcattgttttgcttcggtacctcacg 9379
Query: 361 aattattccagaaactccaactaaaatgtgtacgtgcatcggaaattgggaatattaagg 420
|| |||||||| |||| ||||| | ||| |||||||||||||||||||||||||
Sbjct: 9378 ggggatgccagaaacgccaagggaaatggggacgggcatcggaaattgggaatattaagg 9319
Query: 421 aacatatcctgcattatatctcatttcctacataaatttatgctcaatgaaatttgtatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9318 aacatatcctgcattatatctcatttcctacataaatttatgctcaatgaaatttgtatg 9259
Query: 481 tgctgatggacgaaaagataggttggaaattgacgttacaaactccgagaaaaaacatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9258 tgctgatggacgaaaagataggttggaaattgacgttacaaactccgagaaaaaacatga 9199
Query: 541 acctatacataaatmagaagcatccttttgacaatagtactgagaccaaaagatgcgcta 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9198 acctatacataaataagaagcatccttttgacaatagtactgagaccaaaagatgcgcta 9139
Query: 601 tattggttatcgtaggaatccttcaagcctcaaagccattcgttgctggtcgccactctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9138 tattggttatcgtaggaatccttcaagcctcaaagccattcgttgctggtcgccactctt 9079
Query: 661 acggctatatgtcagccttgttttttgtctcctccaactttatttctatgaacttcccta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9078 acggctatatgtcagccttgttttttgtctcctccaactttatttctatgaacttcccta 9019
Query: 721 acgttccacatattactagacttttcgatcttctactggtactgaaggaaaaaaaaggct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9018 acgttccacatattactagacttttcgatcttctactggtactgaaggaaaaaaaaggct 8959
Query: 781 aaattcacgcmttattaagggagaaaaaaggtataaaaggtttaattcttcggtggcaat 840
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8958 aaattcacgcattattaagggagaaaaaaggtataaaaggtttaattcttcggtggcaat 8899
Query: 841 ccctagatttgccattgccaatttgatgtaatttgtgattgtctggtawattgc 894
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8898 ccctagatttgccattgccaatttgatgtaatttgtgattgtctggtatattgc 8845
>3x_Contig1722
Length = 17718
Score = 215 bits (108), Expect = 1e-55
Identities = 127/132 (96%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 1 gatccatctaggccatcccctctggataccacaggatccatatgcacagtcactgacgtc 60
|||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2047 gatccatctaggtcatccc-tctggataccacaggatccatatgcccagtcactgacgtc 2105
Query: 61 ttggaactctgtcgtgtgctggctagctcacatgacctctcgtctggcttgtcttcagtc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2106 ttggaactctgccgtgtgctggctagctcacatgacctctcgtctggcttgtcttaagtc 2165
Query: 121 tatcttacgaca 132
||||||||||||
Sbjct: 2166 tatcttacgaca 2177
>3x_Contig1799
Length = 39855
Score = 131 bits (66), Expect = 2e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 1 gatccatctaggccatcccctctggataccacaggatccatatgcacagtcactgacgtc 60
|||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 29745 gatccatctaggccttcccttctggataccacaggatccatatgcccagtcactgacgtc 29686
Query: 61 ttggaactctgtcgtgtgctggctagctcacatgacct 98
||||||||||| || | | ||| |||||||||||||||
Sbjct: 29685 ttggaactctgccgagcgttggatagctcacatgacct 29648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5720
Number of Sequences: 1807
Number of extensions: 5720
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 3
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)